dig
Copyright Notice
dig is Copyright (C) 2001 Magnus Palmblad
dig is free software; you can redistribute it and/or
modify it under the terms of the GNU General Public License as
published by the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for
more details.
You should have received a copy of the GNU General Public
License along with this program; if not, write to the Free Software Foundation,
Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
About dig
dig is a simple but flexible in silicodigester of protein sequences in the FASTA format. It allows for almost any enzyme to be simulated, including "MS/MS" enzymes to generate CID or ETD fragments.
Download dig here. (Right-click and choose "Save Link As...".)
Compiling dig
Compile dig with: gcc -o dig dig.c -lm
Using dig
Usage: dig <sequence list> <cleavage rules> <modifications>
where <sequence list> is a list of sequences in FASTA format, the <cleavage rules> a text file defining the enzyme or MS/MS fragmentation and <modifications> a text file defining the modifications.
magnus.palmblad@gmail.com